Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Mir877-201ENSMUST00000104738 85 ntBASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.08□□□□□ -0.8
Igh-VJ558P01758 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gm20495-201ENSMUST00000173902 235 ntBASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.08□□□□□ -0.8
Igh-VJ558P01758 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Gm26047-201ENSMUST00000157308 113 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Gm8100-201ENSMUST00000182906 988 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Gm26047-202ENSMUST00000198840 115 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Gm18730-201ENSMUST00000218038 343 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igh-VJ558P01758 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Igh-VJ558P01758 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igh-VJ558P01758 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igh-VJ558P01758 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igh-VJ558P01758 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igh-VJ558P01758 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igh-VJ558P01758 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igh-VJ558P01758 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igh-VJ558P01758 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms