Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
BckdkO55028 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
BckdkO55028 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.87□□□□□ -0.67
BckdkO55028 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
BckdkO55028 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Gm23912-201ENSMUST00000104687 87 ntBASIC10.87□□□□□ -0.67
BckdkO55028 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.87□□□□□ -0.67
BckdkO55028 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.87□□□□□ -0.67
BckdkO55028 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.87□□□□□ -0.67
BckdkO55028 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.87□□□□□ -0.67
BckdkO55028 Gm18711-201ENSMUST00000199341 750 ntBASIC10.87□□□□□ -0.67
BckdkO55028 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.87□□□□□ -0.67
BckdkO55028 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Rgr-203ENSMUST00000225070 4704 ntBASIC10.87□□□□□ -0.67
BckdkO55028 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
BckdkO55028 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.87□□□□□ -0.67
BckdkO55028 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BckdkO55028 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.87□□□□□ -0.67
BckdkO55028 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.86□□□□□ -0.67
BckdkO55028 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
BckdkO55028 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
BckdkO55028 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
BckdkO55028 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.86□□□□□ -0.67
BckdkO55028 Gm11450-201ENSMUST00000121144 333 ntBASIC10.86□□□□□ -0.67
BckdkO55028 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.86□□□□□ -0.67
BckdkO55028 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
BckdkO55028 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
BckdkO55028 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.86□□□□□ -0.67
BckdkO55028 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.86□□□□□ -0.67
BckdkO55028 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.86□□□□□ -0.67
BckdkO55028 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.86□□□□□ -0.67
BckdkO55028 Gm270-201ENSMUST00000223010 976 ntBASIC10.86□□□□□ -0.67
BckdkO55028 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Gm5455-201ENSMUST00000058710 715 ntBASIC10.86□□□□□ -0.67
BckdkO55028 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.86□□□□□ -0.67
BckdkO55028 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BckdkO55028 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.86□□□□□ -0.67
BckdkO55028 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.85□□□□□ -0.67
BckdkO55028 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BckdkO55028 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
BckdkO55028 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BckdkO55028 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
BckdkO55028 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BckdkO55028 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BckdkO55028 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
BckdkO55028 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
BckdkO55028 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BckdkO55028 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms