Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm9192-201ENSMUST00000183221 985 ntBASIC10.58□□□□□ -0.72
Rnf13O54965 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.58□□□□□ -0.72
Rnf13O54965 Gm43118-201ENSMUST00000199149 775 ntBASIC10.58□□□□□ -0.72
Rnf13O54965 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.58□□□□□ -0.72
Rnf13O54965 Lect2-202ENSMUST00000225183 823 ntBASIC10.58□□□□□ -0.72
Rnf13O54965 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.58□□□□□ -0.72
Rnf13O54965 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Rnf13O54965 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rnf13O54965 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.58□□□□□ -0.72
Rnf13O54965 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf13O54965 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.58□□□□□ -0.72
Rnf13O54965 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
Rnf13O54965 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Rnf13O54965 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.57□□□□□ -0.72
Rnf13O54965 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Gm11531-201ENSMUST00000117614 555 ntBASIC10.57□□□□□ -0.72
Rnf13O54965 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Snora78-201ENSMUST00000158630 128 ntBASIC10.57□□□□□ -0.72
Rnf13O54965 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.57□□□□□ -0.72
Rnf13O54965 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.57□□□□□ -0.72
Rnf13O54965 Gm38158-201ENSMUST00000194617 339 ntBASIC10.57□□□□□ -0.72
Rnf13O54965 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.57□□□□□ -0.72
Rnf13O54965 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf13O54965 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.57□□□□□ -0.72
Rnf13O54965 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.57□□□□□ -0.72
Rnf13O54965 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Rnf13O54965 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf13O54965 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rnf13O54965 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.56□□□□□ -0.72
Rnf13O54965 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.56□□□□□ -0.72
Rnf13O54965 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Rnf13O54965 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.56□□□□□ -0.72
Rnf13O54965 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rnf13O54965 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rnf13O54965 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms