Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm11470-201ENSMUST00000118868 1475 ntBASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm9133-201ENSMUST00000118289 540 ntBASIC21.02■□□□□ 0.95
Ccdc180J3QNE4 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC21.02■□□□□ 0.95
Ccdc180J3QNE4 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc180J3QNE4 AC122024.3-201ENSMUST00000217719 294 ntBASIC21.02■□□□□ 0.95
Ccdc180J3QNE4 AC162932.1-201ENSMUST00000219209 872 ntBASIC21.02■□□□□ 0.95
Ccdc180J3QNE4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc180J3QNE4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc180J3QNE4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Snord23-201ENSMUST00000116828 109 ntBASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Gm15620-201ENSMUST00000122949 270 ntBASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Gm43610-201ENSMUST00000199117 365 ntBASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc180J3QNE4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccdc180J3QNE4 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Gm3329-201ENSMUST00000159873 556 ntBASIC21■□□□□ 0.95
Ccdc180J3QNE4 Gm19246-201ENSMUST00000173599 255 ntBASIC21■□□□□ 0.95
Ccdc180J3QNE4 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Gm5870-201ENSMUST00000196461 282 ntBASIC21■□□□□ 0.95
Ccdc180J3QNE4 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC21■□□□□ 0.95
Ccdc180J3QNE4 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Gm44806-201ENSMUST00000205574 2303 ntBASIC21■□□□□ 0.95
Ccdc180J3QNE4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc180J3QNE4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Gm2448-201ENSMUST00000207080 559 ntBASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 CT030652.1-201ENSMUST00000227377 1235 ntBASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Gm42913-201ENSMUST00000197936 1853 ntBASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Gm18499-201ENSMUST00000220808 1021 ntBASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ccdc180J3QNE4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms