Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm15136-201ENSMUST00000120552 533 ntBASIC11.01□□□□□ -0.65
Colca2F8VPY8 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm8384-201ENSMUST00000190905 704 ntBASIC11.01□□□□□ -0.65
Colca2F8VPY8 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm26782-203ENSMUST00000227103 751 ntBASIC11.01□□□□□ -0.65
Colca2F8VPY8 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.01□□□□□ -0.65
Colca2F8VPY8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.01□□□□□ -0.65
Colca2F8VPY8 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Colca2F8VPY8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11□□□□□ -0.65
Colca2F8VPY8 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Gm12129-201ENSMUST00000120104 1147 ntBASIC11□□□□□ -0.65
Colca2F8VPY8 Gm12461-201ENSMUST00000120231 1239 ntBASIC11□□□□□ -0.65
Colca2F8VPY8 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Colca2F8VPY8 Gm7627-201ENSMUST00000183205 999 ntBASIC11□□□□□ -0.65
Colca2F8VPY8 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 Gm43275-201ENSMUST00000202053 1020 ntBASIC11□□□□□ -0.65
Colca2F8VPY8 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Gm25580-201ENSMUST00000083409 327 ntBASIC11□□□□□ -0.65
Colca2F8VPY8 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11□□□□□ -0.65
Colca2F8VPY8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Colca2F8VPY8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11□□□□□ -0.65
Colca2F8VPY8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Gm44758-201ENSMUST00000206096 2068 ntBASIC11□□□□□ -0.65
Colca2F8VPY8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11□□□□□ -0.65
Colca2F8VPY8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Colca2F8VPY8 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Colca2F8VPY8 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Gm23769-201ENSMUST00000104441 121 ntBASIC10.99□□□□□ -0.65
Colca2F8VPY8 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.99□□□□□ -0.65
Colca2F8VPY8 Gm11700-201ENSMUST00000119409 403 ntBASIC10.99□□□□□ -0.65
Colca2F8VPY8 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Colca2F8VPY8 Gm42751-201ENSMUST00000198065 559 ntBASIC10.99□□□□□ -0.65
Colca2F8VPY8 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms