Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm25668-201ENSMUST00000157700 129 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm17376-201ENSMUST00000166016 84 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 AA914427-201ENSMUST00000193194 1166 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm6450-201ENSMUST00000200896 574 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm43966-201ENSMUST00000203301 612 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm44651-201ENSMUST00000207343 372 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.96□□□□□ -0.49
Pcdh9F8VPK8 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh9F8VPK8 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Mir8093-201ENSMUST00000185043 137 ntBASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Gm38317-201ENSMUST00000195564 343 ntBASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh9F8VPK8 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Erich3-203ENSMUST00000189969 3460 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm22133-201ENSMUST00000102082 109 ntBASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh9F8VPK8 Gm11500-201ENSMUST00000118237 601 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms