Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm14441-201ENSMUST00000121960 540 ntBASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm8194-201ENSMUST00000159783 859 ntBASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm6114-201ENSMUST00000182472 968 ntBASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.57□□□□□ -0.56
Srp54bE9PXC0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm3551-201ENSMUST00000190750 664 ntBASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm34023-201ENSMUST00000195539 217 ntBASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm43520-201ENSMUST00000197996 164 ntBASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp54bE9PXC0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Srp54bE9PXC0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.55□□□□□ -0.56
Srp54bE9PXC0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms