Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usf3B2RUQ2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm25545-201ENSMUST00000122673 323 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Mir6546-201ENSMUST00000184460 62 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm3332-201ENSMUST00000189337 928 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm9136-201ENSMUST00000193368 454 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm7902-201ENSMUST00000198842 947 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 CT030637.1-201ENSMUST00000228016 669 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm11892-201ENSMUST00000117711 1202 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm11801-201ENSMUST00000117807 746 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm14724-201ENSMUST00000118400 537 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm12899-201ENSMUST00000120565 551 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gm8325-201ENSMUST00000099086 453 ntBASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usf3B2RUQ2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm12857-201ENSMUST00000117678 592 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm14247-201ENSMUST00000120950 237 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms