Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm11340-201ENSMUST00000119226 412 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm9673-201ENSMUST00000119287 781 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm29067-201ENSMUST00000190821 470 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm18514-201ENSMUST00000218980 436 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.91□□□□□ -0.34
Scn3aA2ASI5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn3aA2ASI5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scn3aA2ASI5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn3aA2ASI5 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn3aA2ASI5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn3aA2ASI5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn3aA2ASI5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn3aA2ASI5 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn3aA2ASI5 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn3aA2ASI5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms