Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm42499-201ENSMUST00000196193 1412 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Mir688-201ENSMUST00000102055 75 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm29168-201ENSMUST00000189953 687 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm43013-201ENSMUST00000198216 247 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm44498-201ENSMUST00000199509 111 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 AC154197.1-201ENSMUST00000225136 1382 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm26407-201ENSMUST00000158504 307 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm10807-201ENSMUST00000177134 795 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm26532-201ENSMUST00000180630 690 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm16475-202ENSMUST00000209033 528 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Zcchc9-201ENSMUST00000022121 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm28937-201ENSMUST00000185413 695 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm29400-201ENSMUST00000187208 695 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm28662-201ENSMUST00000188446 695 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm28251-201ENSMUST00000188835 695 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm29214-201ENSMUST00000190216 570 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm37318-201ENSMUST00000194325 695 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm38017-201ENSMUST00000194768 695 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm37287-201ENSMUST00000195449 695 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm37793-201ENSMUST00000195548 695 ntBASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Ubr4A2AN08 Ephx1-202ENSMUST00000111068 1699 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms