Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim3Q9R1R2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim3Q9R1R2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim3Q9R1R2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim3Q9R1R2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim3Q9R1R2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim3Q9R1R2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm14028-201ENSMUST00000117434 479 ntBASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm16505-201ENSMUST00000179981 232 ntBASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm27341-201ENSMUST00000183570 106 ntBASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm9136-201ENSMUST00000193368 454 ntBASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm37666-201ENSMUST00000194110 866 ntBASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm18711-201ENSMUST00000199341 750 ntBASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm8385-201ENSMUST00000058999 643 ntBASIC11.05□□□□□ -0.64
Trim3Q9R1R2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim3Q9R1R2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm7722-201ENSMUST00000120646 741 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm14247-201ENSMUST00000120950 237 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm14277-201ENSMUST00000121195 360 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm24749-201ENSMUST00000157838 343 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm7003-201ENSMUST00000195089 312 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim3Q9R1R2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms