Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tubd1Q9R1K7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm12165-201ENSMUST00000117047 342 ntBASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm18367-201ENSMUST00000176139 600 ntBASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubd1Q9R1K7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm4294-201ENSMUST00000105169 614 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Mir7070-201ENSMUST00000183657 86 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Olfr584-201ENSMUST00000098210 964 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubd1Q9R1K7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Tubd1Q9R1K7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.83□□□□□ -0.52
Tubd1Q9R1K7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubd1Q9R1K7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubd1Q9R1K7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubd1Q9R1K7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubd1Q9R1K7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubd1Q9R1K7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tubd1Q9R1K7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubd1Q9R1K7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms