Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf40aQ9R1C7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Gm17827-201ENSMUST00000211825 742 ntBASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Prpf40aQ9R1C7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gm45186-201ENSMUST00000206874 478 ntBASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf40aQ9R1C7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm11660-201ENSMUST00000120955 412 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms