Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn11aQ9R053 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn11aQ9R053 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.68□□□□□ -0.22
Scn11aQ9R053 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn11aQ9R053 Gm7069-201ENSMUST00000182418 1008 ntBASIC13.68□□□□□ -0.22
Scn11aQ9R053 Gm29304-201ENSMUST00000186555 695 ntBASIC13.68□□□□□ -0.22
Scn11aQ9R053 Gm29223-201ENSMUST00000188867 695 ntBASIC13.68□□□□□ -0.22
Scn11aQ9R053 Gm37921-201ENSMUST00000194333 695 ntBASIC13.68□□□□□ -0.22
Scn11aQ9R053 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.68□□□□□ -0.22
Scn11aQ9R053 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn11aQ9R053 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn11aQ9R053 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn11aQ9R053 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.67□□□□□ -0.22
Scn11aQ9R053 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm12337-201ENSMUST00000119634 400 ntBASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm13204-201ENSMUST00000120110 821 ntBASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.67□□□□□ -0.22
Scn11aQ9R053 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.67□□□□□ -0.22
Scn11aQ9R053 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.67□□□□□ -0.22
Scn11aQ9R053 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn11aQ9R053 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm22379-201ENSMUST00000157480 131 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm24809-201ENSMUST00000175318 271 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm24954-201ENSMUST00000178831 110 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm45085-201ENSMUST00000209100 441 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm7525-201ENSMUST00000219425 454 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm24248-201ENSMUST00000157321 322 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms