Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SrfQ9JM73 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.24□□□□□ -0.61
SrfQ9JM73 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SrfQ9JM73 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm15719-201ENSMUST00000120619 635 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm20778-201ENSMUST00000178524 627 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm9192-201ENSMUST00000183221 985 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.23□□□□□ -0.61
SrfQ9JM73 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm35713-201ENSMUST00000210516 199 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm4803-201ENSMUST00000218729 1279 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.23□□□□□ -0.61
SrfQ9JM73 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.23□□□□□ -0.61
SrfQ9JM73 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.23□□□□□ -0.61
SrfQ9JM73 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SrfQ9JM73 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
SrfQ9JM73 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.22□□□□□ -0.61
SrfQ9JM73 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SrfQ9JM73 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
SrfQ9JM73 Gm14807-201ENSMUST00000116640 983 ntBASIC11.22□□□□□ -0.61
SrfQ9JM73 Gm13047-201ENSMUST00000117116 815 ntBASIC11.22□□□□□ -0.61
SrfQ9JM73 Gm13117-201ENSMUST00000120894 691 ntBASIC11.22□□□□□ -0.61
SrfQ9JM73 Gm14905-201ENSMUST00000122351 639 ntBASIC11.22□□□□□ -0.61
SrfQ9JM73 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.22□□□□□ -0.61
SrfQ9JM73 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.22□□□□□ -0.61
SrfQ9JM73 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SrfQ9JM73 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SrfQ9JM73 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms