Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm11478-201ENSMUST00000117851 599 ntBASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm9136-201ENSMUST00000193368 454 ntBASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ube4bQ9ES00 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm24644-201ENSMUST00000157114 139 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm17208-201ENSMUST00000168388 535 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm22121-201ENSMUST00000175148 54 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm27331-201ENSMUST00000183705 60 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm29705-201ENSMUST00000212598 474 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Gm10146-201ENSMUST00000072739 309 ntBASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ube4bQ9ES00 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms