Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb3Q9ERD7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Gm23200-201ENSMUST00000104379 132 ntBASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Gm25732-201ENSMUST00000175168 60 ntBASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb3Q9ERD7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb3Q9ERD7 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Gm12566-201ENSMUST00000121479 359 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Gm14441-201ENSMUST00000121960 540 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Gm3786-201ENSMUST00000202659 378 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Gm19994-201ENSMUST00000217086 586 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms