Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Gm4482-201ENSMUST00000200876 742 ntBASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Gm45113-201ENSMUST00000207518 165 ntBASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf6Q9DBU5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Gm14028-201ENSMUST00000117434 479 ntBASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Gm6867-201ENSMUST00000219165 425 ntBASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Mir433-201ENSMUST00000093564 124 ntBASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.54□□□□□ -0.4
Rnf6Q9DBU5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm24891-201ENSMUST00000104391 136 ntBASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm27530-201ENSMUST00000184096 98 ntBASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms