Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Gm9136-201ENSMUST00000193368 454 ntBASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Gm6180-201ENSMUST00000065243 498 ntBASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim42Q9D2H5 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim42Q9D2H5 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm24934-201ENSMUST00000103764 111 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm12502-201ENSMUST00000120197 444 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm13342-201ENSMUST00000121055 207 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm27023-201ENSMUST00000182372 285 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm6745-201ENSMUST00000199216 526 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim42Q9D2H5 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Gm11814-201ENSMUST00000119515 929 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Mir1894-201ENSMUST00000122802 81 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Gm9908-201ENSMUST00000211534 448 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Gm2594-201ENSMUST00000214774 742 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms