Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Gm12165-201ENSMUST00000117047 342 ntBASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Gm8815-201ENSMUST00000173809 620 ntBASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Gm9136-201ENSMUST00000193368 454 ntBASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps28Q9D1C8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gm13611-201ENSMUST00000118269 318 ntBASIC12.01□□□□□ -0.49
Vps28Q9D1C8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gm19353-201ENSMUST00000184561 445 ntBASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps28Q9D1C8 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps28Q9D1C8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm13809-201ENSMUST00000117921 597 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm6335-201ENSMUST00000118081 1194 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm7816-201ENSMUST00000119884 1194 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm13263-201ENSMUST00000121271 838 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm15542-201ENSMUST00000121585 1194 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm14441-201ENSMUST00000121960 540 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12□□□□□ -0.49
Vps28Q9D1C8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12□□□□□ -0.49
Vps28Q9D1C8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm6114-201ENSMUST00000182472 968 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms