Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.06□□□□□ -0.64
Upk1aQ9D132 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.06□□□□□ -0.64
Upk1aQ9D132 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.06□□□□□ -0.64
Upk1aQ9D132 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.06□□□□□ -0.64
Upk1aQ9D132 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.06□□□□□ -0.64
Upk1aQ9D132 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.06□□□□□ -0.64
Upk1aQ9D132 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Upk1aQ9D132 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm11793-201ENSMUST00000120433 981 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm13786-201ENSMUST00000122371 333 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm37424-201ENSMUST00000191727 561 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm43118-201ENSMUST00000199149 775 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 Morn2-202ENSMUST00000227729 656 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.05□□□□□ -0.64
Upk1aQ9D132 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Upk1aQ9D132 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1aQ9D132 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.04□□□□□ -0.64
Upk1aQ9D132 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.04□□□□□ -0.64
Upk1aQ9D132 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.04□□□□□ -0.64
Upk1aQ9D132 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.04□□□□□ -0.64
Upk1aQ9D132 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk1aQ9D132 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1aQ9D132 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms