Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ddx28Q9CWT6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ddx28Q9CWT6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.64
Ddx28Q9CWT6 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm27516-201ENSMUST00000184237 98 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm28882-201ENSMUST00000185504 314 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm29396-201ENSMUST00000185659 716 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm5950-201ENSMUST00000213337 772 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm9368-201ENSMUST00000219348 831 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ddx28Q9CWT6 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Gm12241-201ENSMUST00000118330 726 ntBASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Mir6420-201ENSMUST00000185032 102 ntBASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Gm44364-201ENSMUST00000198368 141 ntBASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Olfr284-202ENSMUST00000206647 966 ntBASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ddx28Q9CWT6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Gm8320-201ENSMUST00000177584 1762 ntBASIC11□□□□□ -0.65
Ddx28Q9CWT6 Gm8303-201ENSMUST00000178371 1762 ntBASIC11□□□□□ -0.65
Ddx28Q9CWT6 Gm8331-201ENSMUST00000178433 1762 ntBASIC11□□□□□ -0.65
Ddx28Q9CWT6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ddx28Q9CWT6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms