Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Gm11597-201ENSMUST00000121423 964 ntBASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Smc1aQ9CU62 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm14644-201ENSMUST00000116671 647 ntBASIC13.15□□□□□ -0.3
Smc1aQ9CU62 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm9211-201ENSMUST00000182882 975 ntBASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm9230-201ENSMUST00000188228 532 ntBASIC13.15□□□□□ -0.3
Smc1aQ9CU62 AY036118-201ENSMUST00000200021 923 ntBASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1aQ9CU62 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smc1aQ9CU62 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smc1aQ9CU62 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Smc1aQ9CU62 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Rmrp-201ENSMUST00000157463 271 ntBASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Gm37835-201ENSMUST00000193305 361 ntBASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1aQ9CU62 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms