Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm45085-201ENSMUST00000209100 441 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm2594-201ENSMUST00000214774 742 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Map1b-203ENSMUST00000223725 2669 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Gm4294-201ENSMUST00000105169 614 ntBASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Gm14497-201ENSMUST00000119537 580 ntBASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldnd1Q9CQX5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cldnd1Q9CQX5 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cldnd1Q9CQX5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cldnd1Q9CQX5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cldnd1Q9CQX5 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cldnd1Q9CQX5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cldnd1Q9CQX5 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cldnd1Q9CQX5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cldnd1Q9CQX5 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm17221-201ENSMUST00000163909 481 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm17073-201ENSMUST00000168069 556 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm23694-201ENSMUST00000179335 110 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm37782-201ENSMUST00000194879 678 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm45527-201ENSMUST00000211052 774 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm9791-201ENSMUST00000060997 447 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm5513-201ENSMUST00000072982 1218 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms