Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Gm16177-201ENSMUST00000120728 718 ntBASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Gm18062-201ENSMUST00000208020 547 ntBASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Gm18055-201ENSMUST00000208254 547 ntBASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Krt88Q9CPR6 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gm24548-201ENSMUST00000158650 108 ntBASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gm16379-201ENSMUST00000161469 348 ntBASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gm8762-201ENSMUST00000193486 339 ntBASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Krt88Q9CPR6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Krt88Q9CPR6 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms