Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm25668-201ENSMUST00000157700 129 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm29615-201ENSMUST00000185371 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm28224-201ENSMUST00000186078 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm29001-201ENSMUST00000186177 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm28292-201ENSMUST00000186593 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm28101-201ENSMUST00000187608 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm29076-201ENSMUST00000187689 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm28302-201ENSMUST00000187931 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm28646-201ENSMUST00000188220 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm28205-201ENSMUST00000189177 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm29032-201ENSMUST00000189797 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm28695-201ENSMUST00000190300 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm37448-201ENSMUST00000192795 697 ntBASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim11Q99PQ2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim11Q99PQ2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trim11Q99PQ2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trim11Q99PQ2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm13996-201ENSMUST00000118456 430 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm28937-201ENSMUST00000185413 695 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm29400-201ENSMUST00000187208 695 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm28662-201ENSMUST00000188446 695 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm28251-201ENSMUST00000188835 695 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm37318-201ENSMUST00000194325 695 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm38017-201ENSMUST00000194768 695 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm37287-201ENSMUST00000195449 695 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm37793-201ENSMUST00000195548 695 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm6450-201ENSMUST00000200896 574 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Lect2-202ENSMUST00000225183 823 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms