Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm15782-201ENSMUST00000121073 445 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm18734-201ENSMUST00000172937 808 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm9211-201ENSMUST00000182882 975 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm28937-201ENSMUST00000185413 695 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm29400-201ENSMUST00000187208 695 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm28686-201ENSMUST00000187404 609 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm28662-201ENSMUST00000188446 695 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm28251-201ENSMUST00000188835 695 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm37835-201ENSMUST00000193305 361 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm37318-201ENSMUST00000194325 695 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm38017-201ENSMUST00000194768 695 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm37287-201ENSMUST00000195449 695 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm37793-201ENSMUST00000195548 695 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tlr3Q99MB1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Gm12857-201ENSMUST00000117678 592 ntBASIC12.59□□□□□ -0.39
Tlr3Q99MB1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tlr3Q99MB1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tlr3Q99MB1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.58□□□□□ -0.39
Tlr3Q99MB1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Gm7467-201ENSMUST00000185173 652 ntBASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Gm7848-201ENSMUST00000210739 718 ntBASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tlr3Q99MB1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms