Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm22877-201ENSMUST00000175451 105 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm8343-201ENSMUST00000182705 994 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm45575-201ENSMUST00000210283 548 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm9797-202ENSMUST00000218003 294 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm9139-201ENSMUST00000218817 700 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.31□□□□□ -0.76
Scrt1Q99M85 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm11663-201ENSMUST00000117888 290 ntBASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm12990-201ENSMUST00000120372 468 ntBASIC10.31□□□□□ -0.76
Scrt1Q99M85 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.31□□□□□ -0.76
Scrt1Q99M85 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm2875-201ENSMUST00000211333 360 ntBASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Mir483-201ENSMUST00000093631 73 ntBASIC10.31□□□□□ -0.76
Scrt1Q99M85 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Scrt1Q99M85 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.3□□□□□ -0.76
Scrt1Q99M85 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms