Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm14109-201ENSMUST00000118814 309 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm15004-201ENSMUST00000119192 630 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm2991-201ENSMUST00000173338 480 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm10254-201ENSMUST00000052888 867 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm25857-201ENSMUST00000082788 129 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap3Q99LM2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Gm12742-201ENSMUST00000117326 410 ntBASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Gm27046-201ENSMUST00000182160 463 ntBASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Gm8885-201ENSMUST00000189382 598 ntBASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap3Q99LM2 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 182.5 ms