Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm23931-201ENSMUST00000103842 109 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm13392-201ENSMUST00000117708 150 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm8738-201ENSMUST00000172606 329 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm9136-201ENSMUST00000193368 454 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm10478-201ENSMUST00000084451 396 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.8□□□□□ -0.52
Cdk9Q99J95 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk9Q99J95 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.79□□□□□ -0.52
Cdk9Q99J95 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.79□□□□□ -0.52
Cdk9Q99J95 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gm5187-201ENSMUST00000117317 991 ntBASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gm27023-201ENSMUST00000182372 285 ntBASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk9Q99J95 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.78□□□□□ -0.52
Cdk9Q99J95 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.78□□□□□ -0.52
Cdk9Q99J95 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Gm24934-201ENSMUST00000103764 111 ntBASIC11.78□□□□□ -0.52
Cdk9Q99J95 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms