Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.24□□□□□ -0.45
Usp3Q91W36 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Usp3Q91W36 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp3Q91W36 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Gm13045-201ENSMUST00000119019 712 ntBASIC12.23□□□□□ -0.45
Usp3Q91W36 Gm23699-201ENSMUST00000158835 135 ntBASIC12.23□□□□□ -0.45
Usp3Q91W36 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.23□□□□□ -0.45
Usp3Q91W36 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Gm37024-201ENSMUST00000192224 868 ntBASIC12.23□□□□□ -0.45
Usp3Q91W36 Gm18717-201ENSMUST00000192744 1241 ntBASIC12.23□□□□□ -0.45
Usp3Q91W36 Gm38117-201ENSMUST00000194653 939 ntBASIC12.23□□□□□ -0.45
Usp3Q91W36 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Usp3Q91W36 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC12.23□□□□□ -0.45
Usp3Q91W36 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.23□□□□□ -0.45
Usp3Q91W36 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Usp3Q91W36 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp3Q91W36 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm9062-201ENSMUST00000117712 727 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm15207-201ENSMUST00000119259 442 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm13461-201ENSMUST00000120980 662 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm25653-201ENSMUST00000158473 138 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm6114-201ENSMUST00000182472 968 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm8480-201ENSMUST00000190350 698 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm5714-201ENSMUST00000197343 566 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm18753-201ENSMUST00000201000 566 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm45575-201ENSMUST00000210283 548 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm6867-201ENSMUST00000219165 425 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Nsd1-205ENSMUST00000224693 852 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 AC129017.2-201ENSMUST00000226118 1284 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms