Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup35Q8R4R6 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Nup35Q8R4R6 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm10434-201ENSMUST00000101158 471 ntBASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm6439-201ENSMUST00000199849 862 ntBASIC9.52□□□□□ -0.89
Nup35Q8R4R6 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup35Q8R4R6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms