Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gm15549-201ENSMUST00000121595 622 ntBASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gm10169-201ENSMUST00000121822 348 ntBASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gm10263-201ENSMUST00000085163 300 ntBASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Gm14807-201ENSMUST00000116640 983 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Gm9135-201ENSMUST00000182963 990 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Gm3726-201ENSMUST00000203110 785 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Gm5468-202ENSMUST00000227851 682 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Gm5805-201ENSMUST00000072779 456 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp7Q8R1T1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm12990-201ENSMUST00000120372 468 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm14395-201ENSMUST00000120494 563 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm15329-201ENSMUST00000121408 155 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms