Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.82□□□□□ -0.52
Clip4Q8CI96 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Gm14028-201ENSMUST00000117434 479 ntBASIC11.82□□□□□ -0.52
Clip4Q8CI96 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Gm16570-201ENSMUST00000161951 436 ntBASIC11.82□□□□□ -0.52
Clip4Q8CI96 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.82□□□□□ -0.52
Clip4Q8CI96 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clip4Q8CI96 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Gm14208-201ENSMUST00000119645 678 ntBASIC11.81□□□□□ -0.52
Clip4Q8CI96 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Rprl1-201ENSMUST00000158050 327 ntBASIC11.81□□□□□ -0.52
Clip4Q8CI96 Gm16505-201ENSMUST00000179981 232 ntBASIC11.81□□□□□ -0.52
Clip4Q8CI96 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.81□□□□□ -0.52
Clip4Q8CI96 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.81□□□□□ -0.52
Clip4Q8CI96 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clip4Q8CI96 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm23912-201ENSMUST00000104687 87 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm24749-201ENSMUST00000157838 343 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm29615-201ENSMUST00000185371 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm28224-201ENSMUST00000186078 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm29001-201ENSMUST00000186177 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm28292-201ENSMUST00000186593 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm28101-201ENSMUST00000187608 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm29076-201ENSMUST00000187689 697 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms