Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm18734-201ENSMUST00000172937 808 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm27552-201ENSMUST00000183351 62 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm27844-201ENSMUST00000183613 62 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm21811-201ENSMUST00000096485 930 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm14028-201ENSMUST00000117434 479 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm12266-201ENSMUST00000120311 962 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm27341-201ENSMUST00000183570 106 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm38151-201ENSMUST00000195085 289 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.87□□□□□ -0.35
Trim9Q8C7M3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms