Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm25881-201ENSMUST00000157783 103 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm27552-201ENSMUST00000183351 62 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm27844-201ENSMUST00000183613 62 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm2965-201ENSMUST00000198365 343 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm19208-201ENSMUST00000213861 912 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm21811-201ENSMUST00000096485 930 ntBASIC11.04□□□□□ -0.64
Ska3Q8C263 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ska3Q8C263 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska3Q8C263 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm11663-201ENSMUST00000117888 290 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm12501-201ENSMUST00000119163 529 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm8566-201ENSMUST00000120174 465 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.03□□□□□ -0.64
Ska3Q8C263 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm4310-201ENSMUST00000177847 889 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm28686-201ENSMUST00000187404 609 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm38117-201ENSMUST00000194653 939 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.03□□□□□ -0.64
Ska3Q8C263 AU022133-201ENSMUST00000200601 873 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 Rps4l-202ENSMUST00000204242 789 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms