Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcal1Q8BJL0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Gm12628-201ENSMUST00000122193 382 ntBASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Gm22877-201ENSMUST00000175451 105 ntBASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Gm29410-201ENSMUST00000188383 694 ntBASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Map1b-203ENSMUST00000223725 2669 ntBASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcal1Q8BJL0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm12274-201ENSMUST00000120062 385 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm16219-201ENSMUST00000120096 274 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm45120-201ENSMUST00000208880 408 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm23105-201ENSMUST00000083719 134 ntBASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcal1Q8BJL0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms