Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm43002-201ENSMUST00000200310 155 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Gm10312-201ENSMUST00000078515 489 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Gm8420-201ENSMUST00000097103 598 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp2bQ8BJF9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Erich3-203ENSMUST00000189969 3460 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm27572-201ENSMUST00000183702 255 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm9230-201ENSMUST00000188228 532 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Olfr284-202ENSMUST00000206647 966 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm18054-201ENSMUST00000207539 555 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm30285-201ENSMUST00000214614 422 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2bQ8BJF9 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm14644-201ENSMUST00000116671 647 ntBASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm13297-201ENSMUST00000120205 934 ntBASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm8062-201ENSMUST00000139696 444 ntBASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm9192-201ENSMUST00000183221 985 ntBASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms