Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Gm6963-201ENSMUST00000147879 379 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.29□□□□□ -0.44
Ccdc40Q8BI79 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm14381-201ENSMUST00000122105 414 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Mir1938-201ENSMUST00000158746 100 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm5070-201ENSMUST00000177599 862 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm38341-201ENSMUST00000195357 515 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm45598-202ENSMUST00000210719 986 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms