Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp6nlQ80XC3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm11980-201ENSMUST00000121445 986 ntBASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm18059-201ENSMUST00000208073 580 ntBASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp6nlQ80XC3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Gm10169-201ENSMUST00000121822 348 ntBASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Gm5805-201ENSMUST00000072779 456 ntBASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Gm25201-201ENSMUST00000083093 170 ntBASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Usp6nlQ80XC3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Gm13117-201ENSMUST00000120894 691 ntBASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp6nlQ80XC3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms