Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm12795-201ENSMUST00000117594 539 ntBASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm14247-201ENSMUST00000120950 237 ntBASIC10.95□□□□□ -0.66
Pif1Q80SX8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm23771-201ENSMUST00000178702 110 ntBASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm28324-201ENSMUST00000187913 264 ntBASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm34023-201ENSMUST00000195539 217 ntBASIC10.95□□□□□ -0.66
Pif1Q80SX8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.95□□□□□ -0.66
Pif1Q80SX8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.95□□□□□ -0.66
Pif1Q80SX8 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm13916-201ENSMUST00000117368 628 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm15352-201ENSMUST00000118696 270 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm8737-201ENSMUST00000122208 642 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm23958-201ENSMUST00000157207 105 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm8815-201ENSMUST00000173809 620 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Mir6958-201ENSMUST00000184207 73 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm38210-201ENSMUST00000191944 809 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm18893-201ENSMUST00000198416 943 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.94□□□□□ -0.66
Pif1Q80SX8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pif1Q80SX8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms