Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gm16166-201ENSMUST00000118291 787 ntBASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gm11956-201ENSMUST00000119525 512 ntBASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gm44506-201ENSMUST00000206278 965 ntBASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nphp3Q7TNH6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm4726-201ENSMUST00000135604 736 ntBASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm6019-201ENSMUST00000148369 736 ntBASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm10731-201ENSMUST00000181171 448 ntBASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm7467-201ENSMUST00000185173 652 ntBASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm5051-201ENSMUST00000204085 485 ntBASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nphp3Q7TNH6 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.21□□□□□ -0.14
Nphp3Q7TNH6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nphp3Q7TNH6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nphp3Q7TNH6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nphp3Q7TNH6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nphp3Q7TNH6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nphp3Q7TNH6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.21□□□□□ -0.14
Nphp3Q7TNH6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nphp3Q7TNH6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Gm44126-201ENSMUST00000204831 514 ntBASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Gm10179-201ENSMUST00000086233 688 ntBASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nphp3Q7TNH6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms