Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gm13827-201ENSMUST00000148801 372 ntBASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gm22379-201ENSMUST00000157480 131 ntBASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gm5190-201ENSMUST00000192434 357 ntBASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gm2448-201ENSMUST00000207080 559 ntBASIC8.93□□□□□ -0.98
NipblQ6KCD5 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NipblQ6KCD5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm18294-201ENSMUST00000176980 1748 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm12274-201ENSMUST00000120062 385 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm9644-201ENSMUST00000212828 1183 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 CT025689.1-201ENSMUST00000225214 283 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm8155-201ENSMUST00000216363 1612 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm10807-201ENSMUST00000177134 795 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm8197-202ENSMUST00000193422 934 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm38151-201ENSMUST00000195085 289 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm5982-201ENSMUST00000196234 512 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm44315-201ENSMUST00000203041 219 ntBASIC8.92□□□□□ -0.98
NipblQ6KCD5 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC8.92□□□□□ -0.98
NipblQ6KCD5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gm15374-201ENSMUST00000119313 844 ntBASIC8.91□□□□□ -0.98
NipblQ6KCD5 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gm17931-201ENSMUST00000208132 634 ntBASIC8.91□□□□□ -0.98
NipblQ6KCD5 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
NipblQ6KCD5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC8.91□□□□□ -0.98
NipblQ6KCD5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gm18798-201ENSMUST00000187264 1700 ntBASIC8.91□□□□□ -0.98
NipblQ6KCD5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.91□□□□□ -0.98
NipblQ6KCD5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NipblQ6KCD5 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms