Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm13350-201ENSMUST00000120519 479 ntBASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm14726-201ENSMUST00000120623 896 ntBASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm6963-201ENSMUST00000147879 379 ntBASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt39Q6IFX4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm24255-201ENSMUST00000104481 128 ntBASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm15004-201ENSMUST00000119192 630 ntBASIC12.91□□□□□ -0.34
Krt39Q6IFX4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm7584-201ENSMUST00000175829 940 ntBASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm27320-201ENSMUST00000184892 109 ntBASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm5455-201ENSMUST00000058710 715 ntBASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt39Q6IFX4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms