Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm22133-201ENSMUST00000102082 109 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm14017-201ENSMUST00000121934 386 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.16□□□□□ -0.3
Sycp1Q62209 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.16□□□□□ -0.3
Sycp1Q62209 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sycp1Q62209 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Sycp1Q62209 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm2260-201ENSMUST00000184965 657 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm7003-201ENSMUST00000195089 312 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm18212-201ENSMUST00000211678 889 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.16□□□□□ -0.3
Sycp1Q62209 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.16□□□□□ -0.3
Sycp1Q62209 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.16□□□□□ -0.3
Sycp1Q62209 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.16□□□□□ -0.3
Sycp1Q62209 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sycp1Q62209 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sycp1Q62209 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.15□□□□□ -0.3
Sycp1Q62209 AY036118-201ENSMUST00000200021 923 ntBASIC13.15□□□□□ -0.3
Sycp1Q62209 Gm17827-201ENSMUST00000211825 742 ntBASIC13.15□□□□□ -0.3
Sycp1Q62209 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Sycp1Q62209 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sycp1Q62209 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sycp1Q62209 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sycp1Q62209 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.14□□□□□ -0.31
Sycp1Q62209 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.14□□□□□ -0.31
Sycp1Q62209 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC13.14□□□□□ -0.31
Sycp1Q62209 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sycp1Q62209 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms