Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.17□□□□□ -0.62
Nr1h4Q60641 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm14660-201ENSMUST00000119809 575 ntBASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.17□□□□□ -0.62
Nr1h4Q60641 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm18893-201ENSMUST00000198416 943 ntBASIC11.17□□□□□ -0.62
Nr1h4Q60641 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nr1h4Q60641 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Mospd4-201ENSMUST00000180618 576 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gm37008-201ENSMUST00000195712 319 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.16□□□□□ -0.62
Nr1h4Q60641 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nr1h4Q60641 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.15□□□□□ -0.62
Nr1h4Q60641 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.15□□□□□ -0.62
Nr1h4Q60641 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms