Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Gm13045-201ENSMUST00000119019 712 ntBASIC13.66□□□□□ -0.22
Prdm1Q60636 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.66□□□□□ -0.22
Prdm1Q60636 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Mir8093-201ENSMUST00000185043 137 ntBASIC13.66□□□□□ -0.22
Prdm1Q60636 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.66□□□□□ -0.22
Prdm1Q60636 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.66□□□□□ -0.22
Prdm1Q60636 Ginm1-202ENSMUST00000065124 300 ntBASIC13.66□□□□□ -0.22
Prdm1Q60636 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Prdm1Q60636 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prdm1Q60636 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Prdm1Q60636 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Prdm1Q60636 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Prdm1Q60636 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.65□□□□□ -0.22
Prdm1Q60636 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Prdm1Q60636 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.65□□□□□ -0.22
Prdm1Q60636 Gm10051-201ENSMUST00000145209 414 ntBASIC13.65□□□□□ -0.22
Prdm1Q60636 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.65□□□□□ -0.22
Prdm1Q60636 Gm8459-201ENSMUST00000162504 760 ntBASIC13.65□□□□□ -0.22
Prdm1Q60636 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.65□□□□□ -0.22
Prdm1Q60636 Gm37835-201ENSMUST00000193305 361 ntBASIC13.65□□□□□ -0.22
Prdm1Q60636 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.65□□□□□ -0.22
Prdm1Q60636 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.65□□□□□ -0.22
Prdm1Q60636 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.65□□□□□ -0.22
Prdm1Q60636 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Prdm1Q60636 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.65□□□□□ -0.22
Prdm1Q60636 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Prdm1Q60636 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prdm1Q60636 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Prdm1Q60636 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Prdm1Q60636 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Prdm1Q60636 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Prdm1Q60636 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Prdm1Q60636 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.64□□□□□ -0.23
Prdm1Q60636 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.64□□□□□ -0.23
Prdm1Q60636 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.64□□□□□ -0.23
Prdm1Q60636 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.64□□□□□ -0.23
Prdm1Q60636 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.64□□□□□ -0.23
Prdm1Q60636 Gm11331-201ENSMUST00000119764 288 ntBASIC13.64□□□□□ -0.23
Prdm1Q60636 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Prdm1Q60636 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.64□□□□□ -0.23
Prdm1Q60636 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms