Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps54Q5SPW0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps54Q5SPW0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps54Q5SPW0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps54Q5SPW0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps54Q5SPW0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps54Q5SPW0 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.02□□□□□ -0.16
Vps54Q5SPW0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vps54Q5SPW0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gm14071-201ENSMUST00000117817 509 ntBASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gm10807-201ENSMUST00000177134 795 ntBASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gm44506-201ENSMUST00000206278 965 ntBASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gm6108-201ENSMUST00000208365 367 ntBASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gm45770-201ENSMUST00000212105 616 ntBASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps54Q5SPW0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Erich3-203ENSMUST00000189969 3460 ntBASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.01□□□□□ -0.17
Vps54Q5SPW0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm22334-201ENSMUST00000158070 133 ntBASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gm4978-201ENSMUST00000071565 801 ntBASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps54Q5SPW0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14□□□□□ -0.17
Vps54Q5SPW0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Vps54Q5SPW0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14□□□□□ -0.17
Vps54Q5SPW0 Gm11949-201ENSMUST00000117640 372 ntBASIC14□□□□□ -0.17
Vps54Q5SPW0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms