Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm23596-201ENSMUST00000104304 132 ntBASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm15207-201ENSMUST00000119259 442 ntBASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm26047-201ENSMUST00000157308 113 ntBASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm28686-201ENSMUST00000187404 609 ntBASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm26047-202ENSMUST00000198840 115 ntBASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm8385-201ENSMUST00000058999 643 ntBASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf20Q5DTM8 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Mir877-201ENSMUST00000104738 85 ntBASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gm3332-201ENSMUST00000189337 928 ntBASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gm18065-201ENSMUST00000221395 526 ntBASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf20Q5DTM8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf20Q5DTM8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rnf20Q5DTM8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rnf20Q5DTM8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Rnf20Q5DTM8 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.92□□□□□ -0.18
Rnf20Q5DTM8 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms