Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rc3h1Q4VGL6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm6485-201ENSMUST00000160676 439 ntBASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm9645-201ENSMUST00000197131 792 ntBASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm44329-201ENSMUST00000197469 112 ntBASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm45550-201ENSMUST00000209380 946 ntBASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rc3h1Q4VGL6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Gm8342-201ENSMUST00000209839 757 ntBASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 CT010431.1-201ENSMUST00000221249 1080 ntBASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rc3h1Q4VGL6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Gm12813-201ENSMUST00000119615 902 ntBASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Gm7504-201ENSMUST00000201449 424 ntBASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rc3h1Q4VGL6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms